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Binding site type
Ligands
Dataset
Protein
Other proteins and peptides, i.e., oligo- and polypeptides of any amino acids chain length
Nucleic
Nucleic acids (DNA or RNA)
Peptide
Peptides, i.e., oligopeptides with less than 20 amino acids in length
Compound
Small molecule drugs, agonists, substrates, substrate-competitive inhibitors but not cofactors
Cofactor
Cofactors and ligands that overlap with cofactors, e.g., cofactor-competitive inhibitors
Glycan
Covalently attached O- and N-glycans
Conserved water
Conserved water molecules, i.e., those found in more than 10 PDB structures (num_occ > 10) at the same location and having high conservation score (cons > 0.6)
Metal ion
Biologically relevant metal ions, i.e., those found in more than 10 PDB structures at the same location